Draw GO enrichment map

Source: R/fct_go.R

This plots each enriched GO term, with its pvalue and gene count as color and size aesthetics. Two GO terms are linked by an edges if they share common genes in the input gene list given for enrichment analysis. The width of the edge is proportionnal to that number of shared genes.

draw_enrich_go_map(go)

Arguments

go

dataframe as returned by DIANE::enrich_go() function.

Examples

data("abiotic_stresses")
data("gene_annotations")
genes <- convert_from_agi(get_locus(abiotic_stresses$heat_DEGs))
background <- convert_from_agi(get_locus(rownames(abiotic_stresses$normalized_counts)))
go <- enrich_go(genes, background)

#> 
draw_enrich_go_map(go)